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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs659494 chr10:88953694 T/A FAM35B chr10:46897641-46939143:+ 0.61 9.92 3.32E-21 Box Plot
THCA rs6600662 chr1:121230790 C/T NBPF14 chr1:148003642-148025863:- 0.37 8.23 1.74E-15 Box Plot
THCA rs6600663 chr1:121222437 A/T NBPF14 chr1:148003642-148025863:- 0.41 9.51 9.17E-20 Box Plot
THCA rs6600664 chr1:121222436 G/A NBPF14 chr1:148003642-148025863:- 0.41 9.51 9.17E-20 Box Plot
THCA rs6600666 chr1:121221403 C/G NBPF14 chr1:148003642-148025863:- 0.42 10 1.71E-21 Box Plot
THCA rs6600669 chr1:121213639 G/C NBPF14 chr1:148003642-148025863:- 0.44 10.35 8.97E-23 Box Plot
THCA rs6600671 chr1:121200490 T/G NBPF14 chr1:148003642-148025863:- -0.38 -8.42 4.58E-16 Box Plot
THCA rs6600673 chr1:121168848 A/G NBPF14 chr1:148003642-148025863:- 0.37 8.18 2.58E-15 Box Plot
THCA rs6600746 chr1:121288121 A/T NBPF14 chr1:148003642-148025863:- 0.39 9.08 2.93E-18 Box Plot
THCA rs6600747 chr1:121273510 T/C NBPF14 chr1:148003642-148025863:- 0.39 9.01 4.78E-18 Box Plot
THCA rs6600749 chr1:121260265 C/G NBPF14 chr1:148003642-148025863:- 0.42 9.9 3.75E-21 Box Plot
THCA rs6601317 chr8:9325120 C/T SGK223 chr8:8175258-8244008:- -0.35 -5.89 7.25E-9 Box Plot
THCA rs6601427 chr8:10156025 A/G SGK223 chr8:8175258-8244008:- 0.4 7.57 1.94E-13 Box Plot
THCA rs6601428 chr8:10156592 A/G SGK223 chr8:8175258-8244008:- 0.33 6.25 9.27E-10 Box Plot
THCA rs6601436 chr8:10178511 T/A SGK223 chr8:8175258-8244008:- -0.36 -5.92 6.04E-9 Box Plot